Source code for pyscf.pbc.scf.rohf

#!/usr/bin/env python
# Copyright 2014-2019 The PySCF Developers. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
# Author: Qiming Sun <osirpt.sun@gmail.com>
#

'''
Restricted open-shell Hartree-Fock for periodic systems at a single k-point

See Also:
    pyscf/pbc/scf/khf.py : Hartree-Fock for periodic systems with k-point sampling
'''

import numpy as np
from pyscf import lib
from pyscf.lib import logger
from pyscf.scf import rohf as mol_rohf
from pyscf.pbc.scf import hf as pbchf
from pyscf.pbc.scf import uhf as pbcuhf
from pyscf import __config__


get_fock = mol_rohf.get_fock
get_occ = mol_rohf.get_occ
get_grad = mol_rohf.get_grad
make_rdm1 = mol_rohf.make_rdm1
energy_elec = mol_rohf.energy_elec
dip_moment = pbcuhf.dip_moment
get_rho = pbcuhf.get_rho

[docs] class ROHF(pbchf.RHF): '''ROHF class for PBCs. ''' get_init_guess = pbcuhf.UHF.get_init_guess init_guess_by_chkfile = pbcuhf.UHF.init_guess_by_chkfile init_guess_by_minao = mol_rohf.ROHF.init_guess_by_minao init_guess_by_atom = mol_rohf.ROHF.init_guess_by_atom init_guess_by_huckel = mol_rohf.ROHF.init_guess_by_huckel init_guess_by_mod_huckel = mol_rohf.ROHF.init_guess_by_mod_huckel eig = mol_rohf.ROHF.eig get_fock = mol_rohf.ROHF.get_fock get_occ = mol_rohf.ROHF.get_occ get_grad = mol_rohf.ROHF.get_grad get_rho = get_rho make_rdm1 = mol_rohf.ROHF.make_rdm1 energy_elec = mol_rohf.ROHF.energy_elec analyze = mol_rohf.ROHF.analyze canonicalize = mol_rohf.ROHF.canonicalize spin_square = mol_rohf.ROHF.spin_square stability = mol_rohf.ROHF.stability dip_moment = pbchf.SCF.dip_moment to_gpu = lib.to_gpu def __init__(self, cell, kpt=np.zeros(3), exxdiv=getattr(__config__, 'pbc_scf_SCF_exxdiv', 'ewald')): pbchf.SCF.__init__(self, cell, kpt, exxdiv) self.nelec = None @property def nelec(self): if self._nelec is not None: return self._nelec else: cell = self.cell ne = cell.nelectron nalpha = (ne + cell.spin) // 2 nbeta = nalpha - cell.spin if nalpha + nbeta != ne: raise RuntimeError('Electron number %d and spin %d are not consistent\n' 'Note cell.spin = 2S = Nalpha - Nbeta, not 2S+1' % (ne, self.spin)) return nalpha, nbeta @nelec.setter def nelec(self, x): self._nelec = x
[docs] def dump_flags(self, verbose=None): pbchf.SCF.dump_flags(self, verbose) logger.info(self, 'number of electrons per cell ' 'alpha = %d beta = %d', *self.nelec) return self
[docs] def get_veff(self, cell=None, dm=None, dm_last=0, vhf_last=0, hermi=1, kpt=None, kpts_band=None): if cell is None: cell = self.cell if dm is None: dm = self.make_rdm1() if kpt is None: kpt = self.kpt if isinstance(dm, np.ndarray) and dm.ndim == 2: dm = np.asarray((dm*.5,dm*.5)) if getattr(dm, 'mo_coeff', None) is not None: mo_coeff = dm.mo_coeff mo_occ_a = (dm.mo_occ > 0).astype(np.double) mo_occ_b = (dm.mo_occ ==2).astype(np.double) dm = lib.tag_array(dm, mo_coeff=(mo_coeff,mo_coeff), mo_occ=(mo_occ_a,mo_occ_b)) vj, vk = self.get_jk(cell, dm, hermi, kpt, kpts_band) vhf = vj[0] + vj[1] - vk return vhf
[docs] def get_bands(self, kpts_band, cell=None, dm=None, kpt=None): '''Get energy bands at the given (arbitrary) 'band' k-points. Returns: mo_energy : (nmo,) ndarray or a list of (nmo,) ndarray Bands energies E_n(k) mo_coeff : (nao, nmo) ndarray or a list of (nao,nmo) ndarray Band orbitals psi_n(k) ''' raise NotImplementedError
[docs] def init_guess_by_1e(self, cell=None): if cell is None: cell = self.cell if cell.dimension < 3: logger.warn(self, 'Hcore initial guess is not recommended in ' 'the SCF of low-dimensional systems.') return mol_rohf.ROHF.init_guess_by_1e(self, cell)
[docs] def to_ks(self, xc='HF'): '''Convert to RKS object. ''' from pyscf.pbc import dft return self._transfer_attrs_(dft.ROKS(self.cell, self.kpt, xc=xc))