Source code for pyscf.pbc.dft.krks_ksymm

#!/usr/bin/env python
# Copyright 2014-2020 The PySCF Developers. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
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# Author: Xing Zhang <zhangxing.nju@gmail.com>
#

import numpy as np
from pyscf import __config__
from pyscf import lib
from pyscf.lib import logger
from pyscf.pbc.lib import kpts as libkpts
from pyscf.pbc.scf import khf, khf_ksymm
from pyscf.pbc.dft import gen_grid, multigrid
from pyscf.pbc.dft import rks, krks

[docs] @lib.with_doc(krks.get_veff.__doc__) def get_veff(ks, cell=None, dm=None, dm_last=0, vhf_last=0, hermi=1, kpts=None, kpts_band=None): if cell is None: cell = ks.cell if dm is None: dm = ks.make_rdm1() if kpts is None: kpts = ks.kpts if isinstance(kpts, np.ndarray): return krks.get_veff(ks, cell, dm, dm_last, vhf_last, hermi, kpts, kpts_band) t0 = (logger.process_clock(), logger.perf_counter()) ground_state = kpts_band is None if kpts_band is None: kpts_band = kpts.kpts_ibz ni = ks._numint if isinstance(ni, multigrid.MultiGridNumInt): if ks.do_nlc(): raise NotImplementedError(f'MultiGrid for NLC functional {ks.xc} + {ks.nlc}') j_in_xc = ni.xc_with_j else: ks.initialize_grids(cell, dm, kpts) j_in_xc = False max_memory = ks.max_memory - lib.current_memory()[0] n, exc, vxc = ni.nr_rks(cell, ks.grids, ks.xc, dm, 0, hermi, kpts=kpts, kpts_band=kpts_band, max_memory=max_memory) logger.info(ks, 'nelec by numeric integration = %s', n) if ks.do_nlc(): if ni.libxc.is_nlc(ks.xc): xc = ks.xc else: assert ni.libxc.is_nlc(ks.nlc) xc = ks.nlc n, enlc, vnlc = ni.nr_nlc_vxc(cell, ks.nlcgrids, xc, dm, 0, hermi, kpts, max_memory=max_memory) exc += enlc vxc += vnlc logger.info(ks, 'nelec with nlc grids = %s', n) t0 = logger.timer(ks, 'vxc', *t0) weight = kpts.weights_ibz vj, vk = krks._get_jk(ks, cell, dm, hermi, kpts, kpts_band, with_j=not j_in_xc) if j_in_xc: ecoul = vxc.ecoul else: vxc += vj ecoul = None if ground_state: ecoul = np.einsum('K,Kij,Kji', weight, dm, vj) * .5 if ni.libxc.is_hybrid_xc(ks.xc): vxc -= .5 * vk if ground_state: exc -= np.einsum('K,Kij,Kji', weight, dm, vk).real * .25 vxc = lib.tag_array(vxc, ecoul=ecoul, exc=exc, vj=None, vk=None) logger.timer(ks, 'veff', *t0) return vxc
[docs] class KsymAdaptedKRKS(krks.KRKS, khf_ksymm.KRHF): get_veff = get_veff kpts = khf_ksymm.KsymAdaptedKSCF.kpts get_ovlp = khf_ksymm.KsymAdaptedKSCF.get_ovlp get_hcore = khf_ksymm.KsymAdaptedKSCF.get_hcore get_jk = khf_ksymm.KsymAdaptedKSCF.get_jk get_occ = khf_ksymm.KsymAdaptedKSCF.get_occ init_guess_by_chkfile = khf_ksymm.KsymAdaptedKSCF.init_guess_by_chkfile dump_chk = khf_ksymm.KsymAdaptedKSCF.dump_chk eig = khf_ksymm.KsymAdaptedKSCF.eig get_orbsym = khf_ksymm.KsymAdaptedKSCF.get_orbsym orbsym = khf_ksymm.KsymAdaptedKSCF.orbsym _finalize = khf_ksymm.KsymAdaptedKSCF._finalize get_init_guess = khf_ksymm.KRHF.get_init_guess def __init__(self, cell, kpts=libkpts.KPoints(), xc='LDA,VWN', exxdiv=getattr(__config__, 'pbc_scf_SCF_exxdiv', 'ewald'), **kwargs): khf_ksymm.KRHF.__init__(self, cell, kpts, exxdiv=exxdiv, **kwargs) rks.KohnShamDFT.__init__(self, xc)
[docs] def dump_flags(self, verbose=None): khf_ksymm.KRHF.dump_flags(self, verbose) rks.KohnShamDFT.dump_flags(self, verbose) return self
[docs] def energy_elec(self, dm_kpts=None, h1e_kpts=None, vhf=None): if h1e_kpts is None: h1e_kpts = self.get_hcore(self.cell, self.kpts) if dm_kpts is None: dm_kpts = self.make_rdm1() if vhf is None or getattr(vhf, 'ecoul', None) is None: vhf = self.get_veff(self.cell, dm_kpts) weight = self.kpts.weights_ibz e1 = np.einsum('k,kij,kji', weight, h1e_kpts, dm_kpts) ecoul = vhf.ecoul exc = vhf.exc tot_e = e1 + ecoul + exc self.scf_summary['e1'] = e1.real self.scf_summary['coul'] = ecoul.real self.scf_summary['exc'] = exc.real logger.debug(self, 'E1 = %s Ecoul = %s Exc = %s', e1, ecoul, exc) if khf.CHECK_COULOMB_IMAG and abs(ecoul.imag) > self.cell.precision*10: logger.warn(self, "Coulomb energy has imaginary part %s. " "Coulomb integrals (e-e, e-N) may not converge !", ecoul.imag) return tot_e.real, ecoul.real + exc.real
[docs] def to_hf(self): '''Convert to KRHF object.''' from pyscf.pbc.scf.khf_ksymm import KRHF return self._transfer_attrs_(KRHF(self.cell, self.kpts))
KRKS = KsymAdaptedKRKS